Package index • FreesearchR

All functions

FreesearchR_palette(): Use the FreesearchR colors

add_class_icon(): Convert class grid column to icon

add_sparkline(): Add sparkline to datagrid

align_axes(): Aligns axes between plots

all_but(): Select all from vector but

append_column(): Append a column to a data.frame

append_list(): Append list with named index

argsstring2list(): Convert string of arguments to list of arguments

baseline_table(): Print a flexible baseline characteristics table

class_icons(): Get data class icons

clean_common_axis(): Extract and clean axis ranges

clean_date(): Attempts at applying uniform date format

clean_sep(): gsub wrapper for piping with default values for separator substituting

columnSelectInput(): A selectizeInput customized for data frames with column labels

compare_missings(): Pairwise comparison of missings across covariables

contrast_text(): Contrast Text Color

corr_pairs_validate(): Correlation pairs validation

correlation_pairs(): Determine significant correlations in the data set

create_column_ui() create_column_server() list_allowed_operations() modal_create_column() winbox_create_column(): Create new column

create_baseline(): Create a baseline table

create_log_tics(): Create summetric log ticks

create_overview_datagrid(): Create a data overview datagrid

custom_theme(): Custom theme based on unity

cut_variable_ui() cut_variable_server() modal_cut_variable(): Module to Convert Numeric to Factor

cut_var(): Extended cutting function with fall-back to the native base::cut

data_correlations_ui() data_correlations_server(): Data correlations evaluation module

data_import_demo_app(): Test app for the data-import module

data_missings_ui() data_missings_server() visual_summary_ui(): Data correlations evaluation module

data_visuals_ui() data_visuals_server() create_plot() plot_box() plot_box_single() plot_hbars() plot_ridge() sankey_ready() plot_sankey() plot_scatter() plot_violin(): Data correlations evaluation module

data_summary_ui() data_summary_server(): Data summary module

data_description(): Ultra short data dascription

data_summary_gather(): Data summary for printing visual summary

data_type(): Data type assessment.

data_type_filter(): Filter function to filter data set by variable type

data_types(): Recognised data types from data_type

default_format_arguments(): Defaults qmd formats

default_parsing(): Default data parsing

dim_change_call(): Dimensions validation

drop_empty_event(): Drop empty events from REDCap export

expression_string(): Deparses expression as string, substitutes native pipe and adds assign

factorize(): Factorize variables in data.frame

file_export(): Title

format_writer(): Merges list of named arguments for qmd header generation

get_fun_options(): Get the function options based on the selected function description

get_label(): Print label, and if missing print variable name

get_plot_options(): Get the function options based on the selected function description

get_var_icon(): Easily get variable icon based on data type or class

getfun(): Wrapper function to get function from character vector referring to function from namespace. Passed to 'do.call()'

gg_theme_export(): GGplot default theme for plotting export objects

gg_theme_shiny(): GGplot default theme for plotting in Shiny

ggeulerr(): Area proportional venn diagrams

grepl_fix(): Matches pattern to vector based on match type

if_not_missing(): Return if available

import_delim() import_xls() import_ods() import_dta() import_rds(): Wrapper to ease data file import

import_file_ui() import_file_server(): Import data from a file

import_file_demo_app(): Test app for the import_file module

index_embed(): Split vector by an index and embed addition

is_any_class(): Test class

is_consecutive(): Checks if elements in vector are equally spaced as indication of ID

is_datetime(): Test is date/datetime/time

is_identical_to_previous(): Test if element is identical to the previous

is_valid_redcap_url(): Test if url is valid format for REDCap API

is_valid_token(): Validate REDCap token

launch_FreesearchR(): Easily launch the FreesearchR app

limit_log(): Easily round log scale limits for nice plots

line_break(): Line breaking at given number of characters for nicely plotting labels

make_validation(): Create validation data.frame

make_validation_alerts(): Create alert from validation data.frame

mcar_validate(): MCAR validation based on a gtsummary table bady

merge_expression(): Merge list of expressions

merge_long(): Wrapper to pivot gtsummary table data to long for plotting

missing_fraction(): Get missingsness fraction

missings_apex_plot(): Plot missings and class with apexcharter

missings_validate(): Validate function of missingness in data

modify_qmd(): Wrapper to modify quarto file to render specific formats

obs_filter_validate(): Observations filter test wrapper

overview_vars(): Create a data overview data.frame ready for sparklines

pipe_string(): Reduce character vector with the native pipe operator or character string

plot(<tbl_regression>): Regression coef plot from gtsummary. Slightly modified to pass on arguments

plot_euler(): Easily plot euler diagrams

plot_euler_single(): Easily plot single euler diagrams

plot_sankey_single(): Beautiful sankey plot

possible_functions(): Get possible regression models

possible_plots(): Get possible regression models

read_input(): Flexible file import based on extension

m_redcap_readUI() m_redcap_readServer() redcap_demo_app(): Shiny module to browser and export REDCap data

regression_model() regression_model_uv() regression_model_list() regression_model_uv_list(): Create a regression model programatically

regression_table(): Create table of regression model

regression_table_create(): Create regression summary table

remove_empty_attr(): Remove empty/NA attributes

remove_empty_cols(): Removes columns with completenes below cutoff

remove_nested_list(): Very simple function to remove nested lists, like when uploading .rds

repeated_instruments(): Get names of repeated instruments

selectInputIcon(): Create a select input control with icon(s)

set_column_label(): (Re)label columns in data.frame

show_data(): Display a table in a window

simple_snake(): Simplified version of the snakecase packages to_snake_case

sort_by(): Drop-in replacement for the base::sort_by with option to remove NAs

specify_qmd_format(): Specify format arguments to include in qmd header/frontmatter

subset_types(): Easily subset by data type function

supported_functions(): Implemented functions

supported_plots(): Implemented functions

symmetrical_scale_x_log10(): Ensure symmetrical plot around 1 on a logarithmic x scale for ratio plots

tbl_merge(): A substitue to gtsummary::tbl_merge, that will use list names for the tab spanner names.

type_icons(): Get data type icons

ui_elements(): FreesearchR UI elements list

unique_short(): Create unique short names of character vector items based on index

update_factor_ui() update_factor_server() modal_update_factor() winbox_update_factor(): Module to Reorder the Levels of a Factor Variable

update_variables_ui() update_variables_server(): Select, rename and convert variables

update_variables_datagrid(): Modified from the datamods pacakge

validation_ui() validation_server(): Validation module

validation_lib(): Validation library

vars_filter_validate(): Variable filter test wrapper

vectorSelectInput(): A selectizeInput customized for named vectors

vertical_stacked_bars(): Vertical stacked bar plot wrapper

visual_summary(): Ggplot2 data summary visualisation based on visdat::vis_dat.

wide2long(): Alternative pivoting method for easily pivoting based on name pattern

wrap_plot_list(): Wrapping

write_quarto(): Wrapper to save data in RDS, load into specified qmd and render